YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|36784596, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKKISSWIA LIFAVLLLAA CDGLEQKNIH GQTMGTYYSI KFVTGSSAPS PEALQKEIDR  60
   61 LLEEVNGQMS TYRPDSELSR FNQSRQIDRP FPVSPATAKV VKEAIYINKL TDGALDVTVG 120
  121 PLVNLWGFGP EGHVTKAPSA SELEKRREWT GIDKLVVEGN NLIKTVPELY IDLSSIAKGY 180
  181 GVDVVAEYLE SQNIKDYMVD IGGEVRTSGH NGKDLLWRIA IEKPSDTGMA QNAQEVIMPG 240
  241 NMSIATSGDY RNYFEQNGVR YSHTIDPKTG NPISHNLVSI TVIAPVCMSA DGLSTGLNVL 300
  301 GPEKGMEVAE NLNIPVFMII KTKNGFEERY SKAFEPYLQK NQ

Type	Start	End	Confidence
Signal Peptide	1	23	0.98
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	342	0.99