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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|36784197, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALFLGLTTE YDRVVSVRCV LKPLIVLVLL ALMGTHAVYA EEEIEFNTDV LDVQDRARID  60
   61 LKEFSRAGYI MPGDYQMAVR LNNSELPEMP VTFMVPPDDP KGSVACLPPE LVKQLGLRAE 120
  121 WESKMTWWNN NQCLEIKTLP GMTVRGDLSS DTLYLSMPQA YLEYHSPDWD PPSRWDEGIF 180
  181 GMMFDYNVNA QIAKPAKGSE NQNVSANGTT GINLGAWRLR ADWQSQYNHV TGRAGSTEKN 240
  241 WDWSRYYLYR AIPHWQAKLT LGEDYLNSDI FDSFRFTGLS LVTDDNMLPP NLRGYAPEVT 300
  301 GVAKTNARVT IRQQGRVLYE TQVAPGPFRI QDINDAVSGK LDVRVEEQDG GLQEFQIDTA 360
  361 NIPYLTRPGR VQYKLAAGKP TNWKHHSEGS GFGLGEFSWG INNGWSLYGG ILGAGNYNAL 420
  421 SLGIGRDLMV FGALSFDVTE SRAHLPDEDQ TLTGGSYRLS YSKRFEEYDS QVTFAGYRFS 480
  481 ERDFMSMSQY LDRRYHDGDA ESNKELYTIM LNKQFTHIGT SIYLNYSHQT YWNRSNNDRY 540
  541 NLSISRYFDI GSYKNINLNL SAYRNKYEGK NDDGMYMTLS LPWGNSGTIS YNAMANREGN 600
  601 SHTVGYYDRI NENSNYRLAV GSSIDGKAAA NGYLTHYGDR AQLTTSASYQ DGRYTTGALS 660
  661 IQGGMTVTPK GAALHRINMP GTTRLMVDTD GIGGVPVKGF GAITHTNMFG KAVISDVNNY 720
  721 YRNSASIDLN KLPDNVEAIR SVQQATLTEG AIGYRKFQVI SGEKAMGMIR LSDGSSPPFG 780
  781 ATVLNKDQRE IGIVSDGGNV YLSGINPAEK LDVRWDGELQ CVIELPQELP KVEEMASLLL 840
  841 LCQLADDNKQ P

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle