YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|36784121, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVKLKTIAT ISALLGSLIL SGCGQEKQDP NHIKVGVIVG AEQEVAEIAK KVAKDKYGLD  60
   61 VELVTFNDFV LPNEALSKGD IDLNAYQHKP YMDQQIKDRG YKMVTVGNSF VYPIAGYSKK 120
  121 IKSLDELQDG SQIALPNDPT NLGRSLLLLQ KQGLIKLKDG IGLLPTVLDV VENPKNLKLV 180
  181 ELEAPQLPRS LDDQKIALAI INTTYASQIG LTPAKDGLFV EDKNSPYVNL LVSREDNKDA 240
  241 ENVKKFVKAY QSDEVDEAAN KIFNGGAVKG W

Type	Start	End	Confidence
Signal Peptide	1	24	0.99
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	271	0.99