YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|36783839, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDFLRGHVG ANQLKPQHEF FDAIGLEKQL RENTTYIALL SLDEAKDVLE DIDSPKPKSP  60
   61 FIKKIFEITD PISPYAGNIH DSFDLFNVIG EFKRLGIKAT EYVGKDGNRY IKISGYAGVR 120
  121 KIITASRYKA SNMKVISMGI GQKGLNSGIV KGMKFSIFFS AAYRTVELMF KDEYTLADFL 180
  181 GNIAVDLAKT VITAFVSWTI GSLMLVTSIA GASVVGVAII VFFVGVGVTV ALDSIDKKYK 240
  241 ISEAVINLIK KEMERKPRTP ETGLNQIFYN WGRYVK

Type	Start	End	Confidence
Cytoplasmic	1	184	0.79
Transmembrane Helix	185	201	0.55
Non-Cytoplasmic	202	208	0.45
Transmembrane Helix	209	232	0.86
Cytoplasmic	233	276	0.83