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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29335981
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYLTCRKSIF ALTAVFGRRS SALRASISVT HRTIGTLIKP KMTIAESSQK SATRKPDSME  60
   61 PILRLNNIEK SLQDTRDYRG LQLENGLKVL LISDPNTDVS AAALSVQVGH MSDPTNLPGL 120
  121 AHFCEHMLFL GTEKYPHENG YTTYLSQSGG SSNAATYPLM TKYHFHVAPD KLDGALDRFA 180
  181 QFFIAPLFTP SATEREINAV NSEHEKNLPS DLWRIKQVDR HLAKPDHAYS KFGSGNKTTL 240
  241 SEIPKSKNID VRDELLKFHK QWYSANIMCL AVIGKESLDE LEGMVLEKFS EIENKNVKVP 300
  301 GWPRHPYAEE RYGQKVKIVP IKDIRSLTIS FTTDDLTQFY KSGPDNYLTH LIGHEGKGSI 360
  361 LSELRRLGWC NDLMAGHQNT QNGFGFFDIV VDLTQEGLEH VDDIVKIVFQ YLEMLRKEGP 420
  421 KKWIFDECVK LNEMRFRFKE KEQPENLVTH AVSSMQIFPL EEVLIAPYLS NEWRPDLIKG 480
  481 LLDELVPSKS RIVIVSQSFE PDCDLAEPYY KTKYGITRVA KDTVQSWENC ELNENLKLAL 540
  541 PNSFIPTNFD ISDVPADAPK HPTIILDTPI LRVWHKQDNQ FNKPKACMTF DMSNPIAYLD 600
  601 PLNCNLNHMM VMLLKDQLNE YLYDAELASL KLSVMGKSCG IDFTIRGFSD KQVVLLEKLL 660
  661 DHLFDFSIDE KRFDILKEEY VRSLKNFKAE QPYQHSIYYL ALLLTENAWA NMELLDAMEL 720
  721 VTYDRVLNFA KEFFQRLHTE CFIFGNVTKQ QATDIAGRVN TRLEATNASK LPILARQMLK 780
  781 KREYKLLAGD SYLFEKENEF HKSSCAQLYL QCGAQTDHTN IMVNLVSQVL SEPCYDCLRT 840
  841 KEQLGYIVFS GVRKVNGANG IRIIVQSAKH PSYVEDRIEN FLQTYLQVIE DMPLDEFERH 900
  901 KEALAVKKLE KPKTIFQQFS QFYGEIAMQT YHFEREEAEV AILRKISKAD FVDYFKKFIA 960
  961 KDGEERRVLS VHIVSQQTDE NATSEAEPVE ITNMERHKPI SDIVTFKSCK ELYPIALPFL1020
 1021 DIKAKGARSK L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle