YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21536777
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLSIFIAVV ALIVCSASAK TASPPAPVLP PTPAPAPAPE NVNLTELLSV AGPFHTFLDY  60
   61 LLSTGVIETF QNQANNTEEG ITIFVPKDDA FKAQKNPPLS NLTKDQLKQL VLFHALPHYY 120
  121 SLSEFKNLSQ SGPVSTFAGG QYSLKFTDVS GTVRIDSLWT RTKVSSSVFS TDPVAVYQLN 180
  181 RVLLPEAIFG TDVPPMPAPA PAPIVSAPSD SPSVADSEGA SSPKSSHKNS GQKLLLAPIS 240
  241 MVISGLVALF L

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	251	0.98