YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21536735
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIAGVLRRSS LPSRQTLSAA LASFNSCISH NLTPATTGAS VSSRFTLASS PNSFGIRARN  60
   61 IHIRSEPSMI VPAGIASQGY ATVTKDRKNE IKKAKIKISP DNVRPLSRKE IALQKEPAEE 120
  121 STSKIKGTKI CIAIRSFVNP EKQAWCLPPH TRKVAMPDTR TLYTVLRSPH VDKKSREQFE 180
  181 MRFKKRFLVI KAQSHELSKK LFWLKRYRIL GAQYELQFHC KTRLDMTQVL GNINGSTTNA 240
  241 Y

Type	Start	End	Confidence
Signal Peptide	1	29	0.95
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	241	0.99