YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15241035, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEPKTKVAE IREWIIEHKL RTVGCLWLSG ISGSIAYNWS KPAMKTSVRI IHARLHAQAL  60
   61 TLAALAGAAA VEYYDHKSGA TDRIPKFLKP DNLNKD

Type	Start	End	Confidence
Cytoplasmic	1	19	0.77
Transmembrane Helix	20	39	0.74
Non-Cytoplasmic	40	54	0.74
Transmembrane Helix	55	74	0.62
Cytoplasmic	75	96	0.53