YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22023949
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFFGILVIG FLSLVSSVNG YYGGWSNAHA TFYGGGDASG TMGGACGYGN LYSQGYGTNT  60
   61 AALSTALFNN GLTCGACYQI RCVNDPQWCL PGSIIVTATN FCPPGGWCDP PQQHFDLSQP 120
  121 VFLRIAQYKA GVVPVSYRRV RCRRRGGIRF TVNGHSYFNL VLVTNVGGAG DVQSVAIKGS 180
  181 RTRWQAMSRN WGQNWQSNSY LNGQSLSFIV TTSDGRRLVS YNVAPPNWSF GQTYTGRQFL 240
  241 Y

Type	Start	End	Confidence
Signal Peptide	1	20	0.97
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	241	0.99