YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22001136
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKCLIVFGLI VALFGAFVGY GYVVFTDLTK PLPKPEFKDD TYWGPGDAKD FVPDEKIYEF  60
   61 KLQVPQSEVD DLRKELNRTL RLTEPLDGIA FEYGFNTYAL EQFVDYWRDN YLTKWDERQE 120
  121 LFNSFKQYKT EIQGLNIHYI HEKVSEEAKE KKHVYPLLLL HGWPGSVREF SDFIPMLTKH 180
  181 SNITDYAFEV VAPSLVGYGW SDAATRPGFN AAEMATVMRN LMLRLGHKKF FIQGGDWGSI 240
  241 IGSNLATLYP ENVIGYHSNM CVLHTPLAIL KGIYGSFFPE KYLPSRFFVD HHFPVWDKWL 300
  301 ELLEESGYFH IQATKPDTIG AALTSSPVGL ASYILEKFQT CTNPGLKQDF GAIVTVFGLE 360
  361 AVLDNLMVYY LTNSATTAAR FYLENVSKTY RDLQLDRVQS PVPMGCARFR FDLASVTDWQ 420
  421 LRDKFPNLTH SMYFQQGSHF AALEMPAMLF NDFTAFVGKI GLHGEKRK

Type	Start	End	Confidence
Signal Peptide	1	21	0.66
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	468	0.97