YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34368390
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.63
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RALILGVLAL TTMLSPCGGQ DDIEADHVGS YGITVYQYYE SKGQYTHEFD GDERFYVDLD  60
   61 KKETIWRIPE FGQLTSFDPQ GALQSIATIK YNLEILTKRS NSTSAVNEVP EATVFSKSPV 120
  121 LLGQPNTLIC FVDNIFPPVI NITWLRNSKP VTEGVYETSF LSNPDHSFHK MAYLTFIPSN 180
  181 DDIYDCKVEH WGLDEPVLRH WEPEVPAPMS ELTETVVCAL GLSVGLVGIV VGTIFIIKGL 240
  241 RSGGSSRHPG PL

Type	Start	End	Confidence
Non-Cytoplasmic	1	215	0.68
Transmembrane Helix	216	237	0.93
Cytoplasmic	238	252	0.63