YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|27808147
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRIVAALLL VSAFAAHAGI QVDATRVIYN GDEKSASLPI HNDSADAYMV QTWLDKGDST  60
   61 KVENKLPMVV VPPIVKLDAQ KSAILRFIYS GQGFPQDQET LLWVNVQEIP PTPKQENVLQ 120
  121 VAVRTRIKLF YRPSSLHTTL DEQVHKLRWQ KAGNQLLAIN DGPLHITFGS VQMQGSNGKP 180
  181 IAVDANMVDP HSRLAIAIPA GARVGNTVSF SYINDFGGRT EVKDAIVH

Type	Start	End	Confidence
Signal Peptide	1	18	0.98
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	228	0.99