YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|29294063, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVIVWWLLT VVVVAFHSAS AAVVESTWEV EYKYWWPDCK EGIVMAINGQ FPGPTIDAVA  60
   61 GDTVIIHVVN KLSTEGVVIH WHGIRQKGTP WADGAAGVTQ CPINPGETFT YKFIVDKAGT 120
  121 HFYHGHYGMQ RSSGLYGMLI VRSPKERLIY DGEFNLLLSD WWHQSIHAQE LALSSRPMRW 180
  181 IGEPQSLLIN GRGQFNCSQA AYFNKGGEKD VCTFKENDQC APQTLRVEPN RVYRLRIAST 240
  241 TALASLNLAV QGHQLVVVEA DGNYVAPFTV NDIDVYSGET YSVLLKTNAL PSKKYWISVG 300
  301 VRGREPKTPQ ALTVINYVDA TESRPSHPPP VTPIWNDTDR SKSFSKKIFA AKGYPKPPEK 360
  361 SHDQLILLNT QNLYEDYTKW SINNVSLSVP VTPYLGSIRY GLKSAYDLKS PAKKLIMDNY 420
  421 DIMKPPPNPN TTKGSGIYNF AFGIVVDVIL QNANVLKGVI SEIHPWHIHG HDFWVLGYGE 480
  481 GKFKPGIDEK TFNLKNPPLR NTVVLYPFGW TAIRFVTDNP GVWFFHCHIE PHLHMGMGVV 540
  541 FVEGVDRIGK MEIPDEALGC GLTRKWLMNR GRP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle