YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MPI_MACFA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPRVFPLS CAVQQYAWGK MGYNSEVARL LASSDPLAQI AEDKPYAELW MGTHPRGDAK  60
   61 IFDNGISQKT LGQWIAENQD SLGSKVKDTF NGNLPFLFKV LSVETPLSIQ AHPNKELAEK 120
  121 LHLQAPQHYP DANHKPEMAI ALTPFQGLCG FRPVEEIVTF LKKVPEFQFL IGDEAATHLK 180
  181 QTMSHDSQAV ASALQSCFSH LMKSEKKVVA EQLNLLVKRI SQQVAAGNNM EDIFGELLLQ 240
  241 LHQQYPGDIG CFAIYFLNLL NLKPGEAMFL EANVPHAYLK GDCVECMACS DNTVRAGLTP 300
  301 KFIDVPTLCE MLSYTPSSSK DRLFLPTRSQ EDPYLSIYDP PVPDFAIMKM EVPGSVTEYK 360
  361 VLALDSASIL LVVQGTVIAS TPTTQTPIPL QRGGVLFIGA NESVSLKLTE PKDLLIFRAC 420
  421 CLL

Type	Start	End	Confidence
Signal Peptide	1	19	0.71
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	423	0.99