YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|34365126
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSALPGWGP AHLQRPLLGP ASCLGILRPA MTAHSFALPV IIFTTFWGLV GIAGPWFVPK  60
   61 GPNRGVIITM LVATAVCCYL FWLIAILAQL NPLFGPQLKN ETIWYVRFLW E

Type	Start	End	Confidence
Cytoplasmic	1	11	0.68
Transmembrane Helix	12	31	0.43
Non-Cytoplasmic	32	35	0.45
Transmembrane Helix	36	58	0.89
Cytoplasmic	59	65	0.54
Transmembrane Helix	66	88	0.92
Non-Cytoplasmic	89	111	0.59