YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|20372967, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTAYDENESK LMRKVKENPF VPVGIAGFFA IVGYRLMKMK NRGDTKMSVH LIHMRVAAQG  60
   61 FVVGAMTVGV LYSMYRDFIV KPREEQKSMQ NK

Type	Start	End	Confidence
Cytoplasmic	1	18	0.83
Transmembrane Helix	19	37	0.94
Non-Cytoplasmic	38	55	0.75
Transmembrane Helix	56	75	0.93
Cytoplasmic	76	92	0.80