YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37591112, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.43
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILSVLSSPA LVFGLLVTRA INFVHSVLFP IPVFCSIETF FTYFSSFPII RKLSMKWQFL  60
   61 WFSIFKFIFS IIMIKLLFSV GYLCFDDLTR AISQFYPPIS GFMGGGNTPM PPTNPFDGFL 120
  121 SSYFDNERSN DQRRGSPSWS EQLPAESGLY LNLDVEDQNK DPIEEQVEAE GLRCDRIKEK 180
  181 IIEKTHSLLI SKGYHIPEKE DIRRVIEIVM FHEESVDIDH RKRRFYYLYS CLGKEETPFW 240
  241 REILKLLAEY NITLFDTRCE H

Type	Start	End	Confidence
Non-Cytoplasmic	1	20	0.43
Transmembrane Helix	21	44	0.78
Cytoplasmic	45	61	0.48
Transmembrane Helix	62	85	0.83
Non-Cytoplasmic	86	261	0.67