YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21326825
Protein type:	Globular with Signal Peptide
Type Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVASLVVLGS LAALVSAGPL SLYSPALGPM DIFKRVNSGC GTSGAESCSN SDDGTCCFEA  60
   61 PGGLLLQTQF WDTDPSTGPS DSWTIHGLWP DNCDGTFESS CDSSRAYTGI GDLLTAQGAS 120
  121 DTLDFMNQYW VDINGQNEQF WEHEWSKHGT CYSTLETSCL PSGSPKGAEA VAFFQQVVTL 180
  181 FKTLPTYQWL AKAGITPDSS KTFTLSEITS ALKSAAGVTP ALDCDGKNLN QISWYFHLKG 240
  241 SLLDGKFVPI DAPKAGSCAS SGLKYPPKSG SSSGGSSGGS TTTTSSGSSS TGNPGSLPSK 300
  301 ATLHASTGGL LSAGTWSTQT LATYTISGSS SSFTLKTSKG SCGVVSSGQF ECGSGVSATT 360
  361 FSAVTSGSSL LLASGGSTKW SSDGTPSGTT QEAIFTGSGH GTSLTLSIVS A

Type	Start	End	Confidence
Signal Peptide	1	17	0.99
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	411	0.98