YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|15554298
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYILLFRFRY RQTRFSSRRV RKRVVFKHEG CNVVQGNVAK RRRRYLQDIF TTLVDAQWRW  60
   61 TLLVFAASFV FSWAFFGFIW WIIAYAHNDL EYTNLKNQSP DLVANITHTV CVTQVSNMMS 120
  121 AFLYSVETQT TIGYGNRYVT EECPEAIFTM CIQCITGVFI QAFMVGIVFA KLSRPKKRAQ 180
  181 TLLFSRNAVI CHRDGVPCLM FRVGDMRKSH IIEAHVRAQI IRKKVTKEGE VLPFYQQELH 240
  241 IGADGGEDRL MFIWPTTIVH KIDRNSPLYM LSASDMLKER FEVVVMLEGV IESTGMTTQA 300
  301 RSSYLPSEVL WGHRFVNVVS FRKETGEYEV DYTLFNNTYD VDTPLCSAKQ LDELKSEYSK 360
  361 SAKCVNAPFA DRTLSASLFQ RIASAASVDH LDPASDESLD SGRLQIRSHS IPNGVLASEL 420
  421 SR

Type	Start	End	Confidence
Cytoplasmic	1	59	0.92
Transmembrane Helix	60	84	0.89
Non-Cytoplasmic	85	145	0.85
Transmembrane Helix	146	170	0.86
Cytoplasmic	171	422	0.81