YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|169158104, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKSENPAE GKEPESSWKD AIYNPRTGEL FGRTARNWGL ILLFYLVFYG FLAAMFVFTL  60
   61 WVMLQTLNDD TPKYRDRVAS PGLVIRPNSL NIEFNRSDPL EYGQYVQHLE SFLHQYNDSE 120
  121 QAKNDLCMAG QYSEQDGESL KKVCQFKRSL LYSCSGMEDT TFGYAKGQPC VIVKMNRIIG 180
  181 LKPSGDPYIN CTSKSVKPLQ MQYFPHEGTI DRMYFPYYGK KTHKGYVQPL VAVKLLLKKE 240
  241 DYNSELIVEC KVEGSNLKNN DERDKFLGRV TFRVLVTE

Type	Start	End	Confidence
Cytoplasmic	1	40	0.91
Transmembrane Helix	41	63	0.92
Non-Cytoplasmic	64	278	0.94