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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|14579225, gi|...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEAHQAVAF QFTVTPDGID LRMSHEALRQ IYLSGLHSWK KKFIRFKNGI ITGVFPASPS  60
   61 SWLIVVVGVM STMYAKIDPS LGVIAKINRT LDATGYLSSR TQNVVSGVLF GTGLWVALIV 120
  121 TMRYSLKVLL SYHGWMFAQH SKMSRATKIW MMMVRVFSGR KTMLYSFQTS LPRLPVPAVQ 180
  181 DTVSRYLESV KPLMKEAEFK RMTALAQDFA VSLGPRLQWY LKLKSWWATN YVSDWWEEYI 240
  241 YLRGRGPLMV NSNYYAMDLL YITPTHIQAA RAGNGIHAIL LYRRKLDREE IKPILLGSTV 300
  301 PLCSAQWERM FNTSRIPGEE TDTIQHLQDS KHIVVFHRGR YFKVWLYYDG RLLKPREIEQ 360
  361 QMQRILDDPS EPQPGEAKLA ALTAGDRVPW AKCRQAYFGH GKNKQSLDAV EKAAFFVTLD 420
  421 ETEQGYRKED PDRSMDGYAK SLLHGQCFDR WFDKSFTFIV FKNGKMGMNA EHSWADAPIV 480
  481 AHLWEYVMSI DSFQLGYEED GHCKGDTNPN IPYPTRLQWD IPEECQEVIE TSLSCANLLA 540
  541 DDVDFHSFPF TTFGKGLIKK CRTSPDAFVQ LALQLAHYKD MGKFSLTYEA SMTRLFREGR 600
  601 TETVRSCTTE SCNFVLAMVD PTQPVEQKLK LFKIAAEKHQ HLYRLAMTGS GVDRHLFCLY 660
  661 VVSKYLAVDS PFLKEVLSEP WRLSTSQTPR QQVELFDLEK NPEYVSSGGG FGPVADDGYG 720
  721 VSYIIVGDHL ISFHISSKFS CPETDSHRFG KHLKQAMTDI IGLFSFCPNS KK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle