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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3005933
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EVSIMDEKNI PIRTYQVCNV MEPSQNNWLR THWIQRGAAQ RIYIEIKFTL RDCNSLPGVI  60
   61 GTCKETFNLY YLESDSDNER YAHESRFSKI DTVAADESFT QVDIGDRIMK LNTEVRDVGV 120
  121 LSRAGFYLAF QDVGACIALV SVHVFYKKCP LAVRNLAQFP DTVTGADTSS LVEVRGSCVD 180
  181 HSEEQEVPKM YCGADGEWLV PIGNCLCNPG YEERNEQCQV CKVGYYRSLS SDVGCRKCPL 240
  241 HSYSVKEGAT SCDCDKGYYR SETDPAAMPC TRPPSAPHNL ISNVNETSVL LDWSPPLSSG 300
  301 GRQDLTYNVV CKQCVRDTQR CSPCGDDVRY SPQRLSLRST RVSVHQLQAH TNYTFQIWAV 360
  361 NGVSKHNPSP EQAVSVTLTT NQAAPSMVMS VQSKDITRHT LALFWDQPEK PNGVILEYEV 420
  421 KYYEKDQNER SYRIVKTTSR NADIKDLTPL TSYVFHVRAR TAAGYGDFSA PFEFSTNTVA 480
  481 APVVGGVMSS AVLLLLVAGC VVVLLLILII TFIITKRRSK YSKTKQGEDK NVQQGVRIYV 540
  541 DPFTYEDPNQ AIREFAKEIN TSCIKIEKVI GIGEFGEVCS GRLKLPGKRE ICVAIKTLKA 600
  601 GFTEQQRLDF LSEASVIGQF DHPNIIHLEG VVTKCKPVMI ITEYMENGSL DMFLRKNDCR 660
  661 FTVIQLVGIL RGIASGMKYL SDMSYVHRDL AARNILVNSN LVCKVSDFGM SRVLEDEPEG 720
  721 AYTTRGGKIP IRWTAPEAIT YRKFTSASDV WSYGIVMWEV MSYGERPYWD MSNQDVIKAI 780
  781 EEGYRLPPPM ECPLALHQLM LECWMRERAD RPKFSQIVNM LDKLIRNPAT LKRTAGGASR 840
  841 SHPSTINHAP SECSAPSLAS VDDWLKLIGL EQYRENFNTA 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle