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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|240255960, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHLKNSTVAE RRYIGKETAG YLTSSSDLDP KPKIKHHRPL QVPEILTPDI GAGAGFSVYN  60
   61 NQVQAQSRHH LTVEIPDSSS HNLTSKRPVV VQSSNPFNVD DFRRQQRASL GPISSYCPSY 120
  121 LLSWFSSSLP SIPSATNQKL LRHVLRVRLI CFHLRFLLLL SVPPLYIFFL LISFRFFLLF 180
  181 VFSIIAFSFV LSISLKFALP HLPSIRLIIA RLLSLKLTPT RSSSSSQENT KHVIWSIGSK 240
  241 PVTEKKTNSG SWVQKYSSGD VYEGEFHRGK CSGSGVYYYS MKGKYEGDWI DGKYDGYGVE 300
  301 TWAKGSRYRG QYRQGMRHGT GIYRFYTGDV YAGEWSNGQS HGCGVYTSED GSRFVGEFKW 360
  361 GVKHGLGHYH FRNGDTYAGE YFADRMHGFG VYQFGNGHRY EGAWHEGRRQ GLGMYTFRNG 420
  421 ETQAGHWEDG VLNCPTEQTT RPDSSFSISH SKVVDTVQQA RKAAKKAREV VKVEERVNRA 480
  481 VMVANRAANA ARVAATKAVQ TQTFHCSSGD DPL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle