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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FUCO2_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEKSSFFVH FSCLLLLLTI IITCGEGVRN PVRPRSSERR ALMDGQDLSR PLKLTFGGPS  60
   61 RNWTDAIPIG NGRLGATIWG GVSSEILNIN EDTIWTGVPA DYTNQKAPEA LAEVRRLVDE 120
  121 RNYAEATSEA VKLSGQPSDV YQIVGDLNLE FDSSHRKYTQ ASYRRELDLE TAVAKVSYSV 180
  181 GAVDFSREFF ASNPDQVIIA KIYASKPGSL SFKVSFDSEL HHHSETNPKA NQILMRGSCR 240
  241 PKRLPVNLKK SINATNIPYD DHKGLQFASI LEVRVSNGGS VSSLGGKKLS VEKADWAVLL 300
  301 LAASSNFDGP FTMPVDSKID PAKECVNRIS SVQKYSYSDL YARHLGDYQK LFNRVSLHLS 360
  361 GSSTNETVQQ ATSTAERVRS FKTDQDPSLV ELLFQYGRYL LISSSRPGTQ VANLQGIWNR 420
  421 DIQPPWDGAP HLNINLQMNY WHSLPGNIRE CQEPLFDYMS ALAINGRKTA QVNYGASGWV 480
  481 AHQVSDIWAK TSPDRGEAVW ALWPMGGAWL CTHAWEHYTY TMDKEFLKKK GYPLLEGCTS 540
  541 FLLDWLIKGK DGFLQTNPST SPEHMFTAPI GKPASVSYSS TMDIAIIKEV FADIVSASEI 600
  601 LGKTNDTLIG KVIAAQAKLP PTRISKDGSI REWAEDFEDP EVHHRHVSHL FGLFPGHTIT 660
  661 VEKSPELAKA VEATLKKRGE EGPGWSTTWK AALWARLHNS EHAYRMVTHI FDLVDPLNER 720
  721 NYEGGLYSNM FTAHPPFQID ANFGFAAAVA EMLVQSTTKD LYLLPALPAD KWPNGIVNGL 780
  781 RARGGVTVSI KWMEGNLVEF GLWSEQIVST RIVYRGISAA AELLPGKVFT FDKDLRCIRT 840
  841 DKL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle