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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|15209312
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSFVDTRIL LLLAVTSYLA SCQSGLKGPK GPRGERGPKG PDGKPGRPGL PGPAGPPGPP  60
   61 GLGGNFAAQY DGAKGPDPGP GPMGLMGPRG PSGSPGAPGA QGLQGHAGEP GEPGQAGAIG 120
  121 ARGPPGPPGK NGEDGNNGRP GKPGDRGVLG AQGARGFPGT PGLPGMKGHR GYNGIDGRKG 180
  181 EPGAAGAKGE NGAAGSNGTP GQRGGRGLPG ERGRVGPAGP AGARGADGNT GPAGPAGPLG 240
  241 SAGPPGFPGA PGPKGELGPA GPTGPSGAQG QRGEPGPNGA VGPVGPPGNP GANGINGAKG 300
  301 AAGLPGIAGA PGFPGPRGGP GPQGPSGASG PRGLGGDPGP VGVKGDSGVK GEPGSAGPQG 360
  361 PPGPSGEEGK RGSTGEQGPT GPLGLRGPRG AAGTRGLPGL AGRSGPMGMP GPRGGVGAPG 420
  421 ARGPPGDAGR AGEAGLVGAR GLPGSPGSSG PPGKEGPSGA AGQDGRTGPP GPTGPRGQPG 480
  481 NIGFPGPKGP SGEAGKPGEK GPVGPTGLRG SPGPDGNNGP AGPVGLAGAP GEKGEQGPSG 540
  541 APGFQGLPGP AGPVGEAGKP GDRGIPGDQG VSGPAGVKGE RGNPGPAGAA GAQGPIGARG 600
  601 PSGTPGPDGN KGEPGAVGPA GAPGPQGAAG MPGERGAAGT PEAKGEKGEA GYRGLEGNAG 660
  661 KDGARGAPGP SGPPGPAGAN GDKGETGSFG PPGPAGPRGA PGERGESGPA GPSGFAGPPG 720
  721 ADGQTGPRGE KGPAGGKGDA GPAGPAGPAG NTGPLGPSGP VGPPGARGDS GPTGLTGFPG 780
  781 APGRVGPPGP AGIVGPAGLT GPAGKDGPRG PRGDVGPAGP PGENGMIGPL GLAGEKGPPG 840
  841 EAGAPGAPGP AGPQGQLGSQ GFNGLPGSRG DRGLPGIPGS VGEPGRVGPA GAPGARGPGG 900
  901 NIGMPGMTGP QGEAGREGSP GNDGPPGRPG AAGIKGDRGE PGSPGTAGPV GAPGPNGPSS 960
  961 AVGRPGNRGE SGPSGPTGAV GPAGARGAPG PAGPRCEKGV AGEKGDRGMK GLRGHPGLQG1020
 1021 MPGPNGPSGD SGAAGIAGPS GPRGPAGPNG PAGKDGSNGM PGAIGPPGHR GPAGHVGPAG1080
 1081 PPGSPGLPGP PGPSGGGYDT SGGYDEYRAD QASLRAKDYE VDATIKSLNT QIENLLSPEG1140
 1141 SKKNPARTCR DIRLSHPEWS SGFYWIDPNQ GCTMDAIKAF CDFSTGQTCI HPHPESIPRK1200
 1201 NWYRSSQEKK HTWFGETINS GTEFAYNDET LSPQSMATQL AFMRLLANQA VQNITYHCKN1260
 1261 SIAYMDAENG NLKKAVLLQG SNDVELRAEG NSRFTFSVLE DGCSRHTGQW SKTVIEYRTN1320
 1321 KPSRLPILDI APLDIGGADQ EFGLDIGPVC FK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle