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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55251348, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.48
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKRVAIIGG GTSGLACIKC CLDEGLEPVC FETSDDIGGL WRFKENPDLD QASIYHSLII  60
   61 NTSKEMMCYS DYPIPAHFPN YMHNSLIMEY FRMYAENFQL KRHIRFQTRV LHVTPRPDFP 120
  121 HSGQWDVETE SKDGLREKQV FDAVMVCTGH HCHPHLPLKD FPGIDTFKGK FFHSRDYKNP 180
  181 EDWRGKRAVV IGIGNSGGDI AVELSRMAKQ VYLSTRKGSW ILNRVGDSGV PFDMMFNNRA 240
  241 VMWFLDSLPV KYRNKLGESR LNKRFDHKLY GLQPEHRIFS QHPMVNDDLP NRILSGTVSV 300
  301 KPNVQEFRGS SVVFEDGTVE DNIDLVVFAT GYTFSFPFLS SHVIPVSNNK VSLYKFVYPP 360
  361 GLERSTLAVI GLIQPLGAIM PISEMQARWA TRVFKGLCKL PSKNAMMKDI KAKEQAMTQR 420
  421 YVAAQRHTIQ VDYIPYMDEL AKQVGVRPSI PRLLLTDPRL AFKVIFGPCT PYQFRLHGPG 480
  481 QWEGARQAIL TQWDRVVEPL KTRCTKEPQS QSFSHSLIFS VSVAGLLSAL YYGRASLQTF 540
  541 LENPSALLDK IRGFVPLPMP TQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle