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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55251346, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.95
Topology Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKRVAVIGA GSSGLAAIKC CLDEGLEPVC FESSDDIGGL WRFREKPETD RCSIYHSLTV  60
   61 NTSKEMMCYS DFPVPDNFPN FMHNSLIVQY YRLYAEHFNL FEHIHFQTTV RSVRQRPDFS 120
  121 VSGQWEVVTA DREGQVETHV FDGVLVCAGH YTQPIKPLSE FPGIDTFPGT VIHSWEYKKP 180
  181 DQYIGKKVVI IGIGNSGGDI AVELSRTCEK TFLSTRKGSW VIGRMVEKGL PLDMMNISRV 240
  241 QDLMHCLIPR ALVNWIGERS LNQRHNHKLY GLQPKHRILD HRPVINDDLP GRILVGELVL 300
  301 KPNVQTFHGS TVVFDDGSFE EKIDAVILCT GYDYKFPFLP DSLNSSADGG MKLYRRIFPP 360
  361 SLERPTLAII GLLQTRGPIM PAAELQARWA TRVITGLKHL PSAEKMSKRI EKDIKPYLKS 420
  421 HPCPKLASLQ VDYIPYLDSI AKEVGACPNI AWLLMTDPAL GLRVFLGPCT PYQFRLSGPG 480
  481 HWKGARQAIL TQWERVAKPM KTRPIPEPSS FSLLFWLGLS GGGAVILAII ALQKKIPLFM 540
  541 GIS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle