YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21780187
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSQLTASS VTASARNLAS LQGLRLSTVK FSSFGTLKPG AVTSRSFRGL VVKAATVVAP  60
   61 KYTSVKPLGD RVLVKIKETE EKTEGGILLP TTAQSKPQGG EVVAVGEGKT IGNTKSESSV 120
  121 KTGAQVIYSK YAGTEVEFNG ANHLLLKEDD IVGLLETDDI KDLKPLNDRV FIKVSEAEEK 180
  181 TAGGLLLTEA SKEKPSIGTV IAVGPGTLDE EGNLKPLSVS PGNTVLYSKY AGNDFKGNDG 240
  241 SNYIALRASD VMAVLS

Type	Start	End	Confidence
Signal Peptide	1	19	0.73
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	256	0.99