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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12055495
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.45
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENAHTKTTE ECLAYFGVNE NTGFSQEQVK KNFEKYGPNE LPAEEGKSIW ELVAEQFEDL  60
   61 LVRILLLAAI IPFVLAWFEE GEETITAFVE PFVILLILIA NAIVGVWQER NAEDAIEALK 120
  121 EYEPEMGKVY RSDRKSVQRI KAREIVPGDI VEIAVGDKVP ADIRLISIKS TTLRIDQSIL 180
  181 TGESVSVIKH TDVVPDLRAV NQDKKNMLFS GTNVGAGKAI GIVIATGANT EIGKIRDEMA 240
  241 ATEQEKTPLQ QKLDEFGEQL SKVISLICVA VWLINIGHFN DPIHGGSWIK GAVYYFKIAV 300
  301 ALAVAAIPEG LPAVITTCLA LGTRRMAKKN AIVRSLPSVE TLGCTSVICS DKTGTLTTNQ 360
  361 MSVCRMFVLD KVEGDVASLN EFTITGSTYA PEGDVQKNDK NVKAGQYDGL VELATICALC 420
  421 NDSSLDFNEA KGVFEKVGEA TETALTTLVE KMNVFNTEVK SLSKVERANA CNSVIKQLMK 480
  481 KEFTLEFSRD RKSMSVYCTP AKASRAAVGN KMFVKGAPEG VIDRCNYVRV GTTRVPFTSA 540
  541 IKDKINAVVK EWGTGRDTLR CLALATRDTP PKREDMVLED ATKFAEYETD LTFVGCVGML 600
  601 DPPRKEVMGS IQLCRDAGIR VIMITGDNKG TAIAICRRIG IFSENDDVST RAYTGREFDD 660
  661 LPPAEQREAV KHASCFARVE PSHKSKIVEF LQSCDEITAM TGDGVNDAPA LKKAEIGIAM 720
  721 GSGTAVAKTA SEMVLADDNF ATIVAAVEEG RAIYNNMKQF IRYLISSNVG EVVCIFLTAA 780
  781 LGLPEALIPV QLLWVNLVTD GLPATALGFN PPDLDIMDRP PRSPKEPLIS GWLFFRYLAI 840
  841 GGYVGAATVG AAAWWFMYAD DGPNVTFYQL SHFMQCSEDN PEFEGHECEV FESPVPMTMA 900
  901 LSVLVTIEMC NALNSLSENQ SLIRMPPWVN FWLLGSICLS MSLHFLILYV EPLPMIFKLT 960
  961 PLNVEQWFVV LKISFPVILL DELLKFVARN YLEG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle