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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FGFR2_DANRE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.68
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFARGWLLGA LLLMTLATVS VARPSLKIDL VNTSAPEEPP TKNQNCVPVL FSVHPGELLK  60
   61 LKCPLSGADD VVWTKDSSSL RPDNRTLVAR DWLQISDATP KDSGLYSCSA TGLRDCDVFS 120
  121 FIVNVTDAIS SGDDEDDTER SDDVGADGEQ MRLPYWTFPE KMEKKLHAVP AANTVKFRCA 180
  181 AAGNPKPKMR WLKNAKPFRQ EDRMGGYKVR LQHWTLIMES VVPSDKGNYT CLVENQYGSI 240
  241 DHTYTLDVVE RSPHRPILQA GLPANVTVQV GQDAKFVCKV YSDAQPHIQW LQHYTKNGSC 300
  301 CGPDGLPYVR VLKTAGVNTT DKEIEVLYLP NVTFEDAGEY TCLAGNSIGI SYHTAWLTVH 360
  361 PAETNPIETD YPPDYVEIAI YCIGVFLIAC MVVIVVVCRM RTSAKKPDFS SQPAVHKLTK 420
  421 QIPLRRQVTV SSDSSSSMSS STPLVRITTR RSSAHDDPIP EYDLPEDPRW EFSRDKLTLG 480
  481 KPLGEGCFGQ VVMAEALGID KDKPKEAVTV AVKMLKDDAT EKDLSDLVSE MEMMKMIGRH 540
  541 KNIINLLGAC TQDGPLYVIV EYASKGNLRE YLRARRPPGM EYSYDIARVS DEPLTFKDLV 600
  601 SCTYQVARGM EYLASQKCIH RDLAARNVLV TESNVMKIAD FGLARDVHNI DYYKKTTNGR 660
  661 LPVKWMAPEA LFDRVYTHQS DVWSFGVLMW EIFTLGGSPY PGIPVEELFK LLKEGHRMDK 720
  721 PANCTNELYM MMKDCWHAIS SHRPTFKQLV EDLDRILTLA TNEEYLDLCA PVEQYSPSFP 780
  781 DTRSSCPSGD DSVFSHDPLA DEPCLPKYQH INGGIKT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle