YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37051131
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSSDSGESR RSIKPQNRPG APAPEQENLP CPRCDSTNTK FCYYNNYNYS QPRHLCKACR  60
   61 RYWTHGGTLR DIPVGGGTRK NAKRSRTHHV AVTSSSSSSA VTSAPEQNYP SMTPIQGGSF 120
  121 PYGGVDGEGK QNMSVCGSFT SLLNNNPQQN SGFLALGGFG LGLGHGLGDM GFGIGREWSF 180
  181 PGMMDGSNMG VPVVSSGIGN SWQLEGGETG FVGGGGDCFS WPGLAISTPG NGLK

Type	Start	End	Confidence
Non-Cytoplasmic	1	151	0.67
Transmembrane Helix	152	174	0.68
Cytoplasmic	175	234	0.44