YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21745458
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLFLLLLSI GYATSQLTGG EGTIAPKGEK GAKGDVGEPG DAGITGLAGD AGSRGLEGDE  60
   61 GKDGEEGDEG DIGPPGPPGV AGGNQTTVVV IYGPPGPPGN QGPIGPPGPK GFNGETGETG 120
  121 ISGPRGLTGD PGNVGPKGLR GKDGREGQKG EPGSKGLMGV TGNPGPSGPP GQRGIKGVKG 180
  181 ELGEPGPKGA KGDVGQNGEA GENGLPGIKG DTGARGPNGT IGFQGAAGPE GLMGPSGPTG 240
  241 PDGVKGPQGP RGSDGQQGTA GLAGESGDPG PSGPVGQPGQ RGEPGYPGIR GDSGDRGDTG 300
  301 PQGLDGLDGP PGDRGLPGPV GLPGAPGPVG ERGEPGKQGP RGFPGQQGEQ GSPGIPGVVG 360
  361 EAGDKGPRGL QGQVGVAGPP GESGSDGRPG PPGPNGAPGQ RGNQGLPGSP GLPGLPGIKG 420
  421 HIGEKGFTGP IGEKGNRGEP GRTGQMGIPG ARGPVGDPGP VGLDGKEGER GIPGKDGLPG 480
  481 PPGQAGLRGI PGLQGATGEK GDKGFKGNKG EIGFDGAPGD KGETGDVGDQ GAPGLPGKQG 540
  541 EAGEPGEQGN RGAQGFVGLP GAPGPQGRQG KRGTPGTPGS RGADGLPGRP GERGYSGEQG 600
  601 TPGSPGVIGE PGRKGPPGKQ GHKGAQGDIG MPGEAGSPGE IGVAGIPGPQ GNPGLPGDEG 660
  661 EIGEAGDRGR DGQPGGRGAP GPRGKPGLPG NPGLRGDTGV SGEDGKPGEI GVPGAPGNPG 720
  721 DIGQPGSQGP MGKPGNPGMQ GDVGPKGFKG ARGPRGRPGK IGQIGEIGKK GESGEKGDQG 780
  781 LPGLQGAIGI PGNQGLPGLA GSAGEQGPQG PPGPDGKLGP KGDKGRSGPD GRPGSPGRPG 840
  841 PDGINGVNGQ PGKDGSRGPQ GHQGPRGKQG NIGPIGLPGT SGMPGLPGPR GPTGDNGADG 900
  901 SDGSDGDIGD DGQVGSQGPQ GESGADGSNG APGRNGNPGV PGPRGEKGEK GPSGDVGVKG 960
  961 AKGNVGPAGE PGVRGDRGPS GEPGTDGEKG ETGIKGDEGS PGPTGATGDR GDNGQRGDQG1020
 1021 DTGYMGFKGR KGPTGPKGLK GMPGIIGEQG DMGPKGVIGE PGPQGAPGPP GQIGLPGRKG1080
 1081 PIGEPGLKGF QGRDGRQGAP GPSGPPGPPG PAMLPPWSGG TLGSNEPKDH LDQNPAQPQP1140
 1141 ENIPTDQRNE ENPFYQVYRY YSSNKTKTVD ELTEIENNFN NRVKILKSSV EAYKKPNGSK1200
 1201 EFPARTCRDI YAFYPDSSSG MYYIDPNKGC IDDAIYVHCN FTKSHDEETK ITTCVYPEKT1260
 1261 MSVEKDSWPT KLHTKAQRWF VEDHELGKLS YAADQSQLTF LGYLSREAYQ NVTFHCQNTL1320
 1321 VWYDKQNNDY KKAMKFKGTE DQEFAYSEDK QSMFMPHAVN DECSNMSKEW RTTTLRFTSR1380
 1381 KYIRLPIIDF APISSEDNNA MFGVELGPVC FM

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle