YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|3980190
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAIAQRFLIS MSYEASTHWT LTAIVLLGFI VGIVSSYPIP SRTNATLLEK RWETLFSRSI  60
   61 LGISGEKSDL NWESDYLLGI KRVRRLYCNA GIGFHLQVLP DGRINGVHNE NQYSLIEIST 120
  121 VERGVVSLYG VRSELFVAMN SRGRLYGTTV FHDECKFRES MLPNNYNAYE SSVYRGSYIA 180
  181 LNKHGRLKRG KKATTAMTVT HFLPRI

Type	Start	End	Confidence
Cytoplasmic	1	16	0.79
Transmembrane Helix	17	39	0.88
Non-Cytoplasmic	40	206	0.83