YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49036419
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKPSLFQII IIVLSIPTTT GRTVGNLRVR EGSPFKIAIF ADLHFGEDTW TDWGPGQDVN  60
   61 SVNVMSAVLD AETPDFVVYL GDVVTANNIA IQNASLFWDK AISPTRDRGI PWATLFGNHD 120
  121 DASFVWPLDW LSSSGIPPLR CPAASDDDGC TFRGTTRVEL IQEEIKSSNA LSYSMISPKE 180
  181 LWPSVSNYVL LVESSDHSKP PVALLYFLDS GGGSYPEVIS NAQVEWFKTK SNTLNPYLRI 240
  241 PELIFWHIPS KAYKKVAPRL WITKPCVGSI NKEKVVAQEA GNGMMRVLEN RSSVKAVFVG 300
  301 HNHGLDWCCP YKDKLWLCFA RHTGYGGYGN WPRGSRILEI SEMPFRIKTW IRMEDGSVHS 360
  361 EVNLTYD

Type	Start	End	Confidence
Signal Peptide	1	21	0.94
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	367	0.99