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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|10438794
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQNKGFRCSL HICITCHAAN PANVSASKGR LMRCVRCPVA YHANDFCLAA GSKILASNSI  60
   61 ICPNHFTPRR GCRNHEHVNV SWCFVCSEGG SLLCCDSCPA AFHRECLNID IPEGNWYCND 120
  121 CKAGKKPHYR EIVWVKVGRY RWWPAEICHP RAVPSNIDKM RHDVGEFPVL FFGSNDYLWT 180
  181 HQARVFPYME GDVSSKDKMG KGVDGTYKKA LQEAAARFEE LKAQKELRQL QEDRKNDKKP 240
  241 PPYKHIKVNR PIGRVQIFTA DLSEIPRCNC KATDENPCGI DSECINRMLL YECHPTVCPA 300
  301 GGRCQNQCFS KRQYPEVEIF RTLQRGWGLR TKTDIKKGEF VNEYVGELID EEECRARIRY 360
  361 AQEHDITNFY MLTLDKDRII DAGPKGNYAR FMNHCCQPNC ETQKWSVNGD TRVGLFALSD 420
  421 IKAGTELTFN YNLECLGNGK TVCKCGAPNC SGFLGVRPKN QPIATEEKSK KFKKKQQGKR 480
  481 RTQGEITKER EDECFSCGDA GQLVSCKKPG CPKVYHADCL NLTKRPAGKW ECPWHQCDIC 540
  541 GKEAASFCEM CPSSFCKQHR EGMLFISKLD GRLSCTEHDP CGPNPLEPGE IREYVPPPVP 600
  601 LPPGPSTHLA EQSTGMAAQA PKMSDKPPAD TNQMLSLSKK ALAGTCQRPL LPERPLERTD 660
  661 SRPQPLDKVR DLAGSGTKSQ SLVSSQRPLD RPPAVAGPRP QLSDKPSPVT SPSSSPSVRS 720
  721 QPLERPLGTA DPRLDKSIGA ASPRPQSLEK TSVPTGLRLP PPDRLLITSS PKPQTSDRPT 780
  781 DKPHASLSQR LPPPEKVLSA VVQTLVAKEK ALRPVDQNTQ SKNRAALVMD LIDLTPRQKE 840
  841 RAASPHQVTP QADEKMPVLE SSSWPASKGL GHMPRAVEKG CVSDPLQTSG KAAAPSEDPW 900
  901 QAVKSLTQAR LLSQPPAKAF LYEPTTQASG RASAGAEQTP GPLSQSPGLV KQAKQMVGGQ 960
  961 QLPALAAKSG QSFRSLGKAP ASLPTEEKKL VTTEQSPWAL GKASSRAGLW PIVAGQTLAQ1020
 1021 SCWSAGSTQT LAQTCWSLGR GQDPKPEQNT LPALNQAPSS HKCAESEQK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle