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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|159155591, gi...
Protein type: Transmembrane
Type Confidence: 0.77
Topology Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVLQFYKWL DIKTVLVFLV VFLFLSDYIR NKSPKNFPPG PWSLPFIGHI HHIEHKKVHL  60
   61 QFLKFAEKYG KIFSIRLFGP RIVVLDGYKL VKEVYLQQGD NLADRPILPM FYDITEDKGL 120
  121 IGSNGYKWKH QRRFALSTFR TFGLGKKSLE PSILLECSCL NDAFSNEQGR PFDPRLLLNN 180
  181 AVSNVICALV FSNRFDYSDH HFQTLLKHIN EVLYLEGTVW AQLYNFFPWL MRRLPGPHQK 240
  241 IFVLLNKVID FVREKVNEHR VDYDPSNPRD YIDCFLAEME KLKDDTAAGF DVENLCICTL 300
  301 DLFVAGTETT STTLYWGLLY IIKYPEIQAK VQQEIDAVVG GSRQPSVSDR DNMPYTNAVI 360
  361 HEIQRMGNIV PLNVFRITVE DTQIGEYSIP KGTLVIGSLT SVLFDESEWE TPHSFNPGHF 420
  421 LDAEGKFRRR DAFLPFSLGK RVCLGEQLAR MELFLFFSSL LQRFTFSPPA GVEPSLDYKL 480
  481 GGTHSPQPYK LCAVPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle