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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|10438450
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSALPYCTWQ EVQARIVQTQ KEHQICIHKR ELTELDIYHR ILRFQNYMVA LVNKSLLPLR  60
   61 FRLPGLGEAV FFTRGLKYNF ELILFWGPGS LFLNEWSLKA EYKRGGQRLE LAQRLSNRIL 120
  121 WIGIANFLLC PLILIWQILY AFFSYAEVLK REPGALGARC WSLYGRCYLR HFNELEHELQ 180
  181 SRLNRGYKPA SKYMNCFLSP LLTLLAKNGA FFAGSILAVL IALTIYDEDV LAVEHVLTTV 240
  241 TLLGVTVTVC RSFIPDQHMV FCPEQLLRVI LAHIHYMPDH WQGNAHRSQT RDEFAQLFQY 300
  301 KAVFILEELL SPIVTPLILI FCLRPRALEI IDFFRNFTVE VVGVGDTCSF AQMDVRQHGH 360
  361 PQWLSAGQTE ASVYQQAEDG KTELSLMHFA ITNPGWQPPR ESTAFLGFLK EQVQRDGAAA 420
  421 GLAQGGLLPE NALFTSIQSL QSESEPLSLI ANVVAGSSCR GPPLPRDLQG SRHRAEVASA 480
  481 LRSFSPLQPG QAPTGRANST MTGSGVDART ASSGSSVWEG QLQSLVLSEY ASTEMSLHAL 540
  541 YMHQLHKQQA QAEPERHVWH RRESDESGES APDEGGEGAR APQSIPRSAS YPCAAPRPGA 600
  601 PETTALHGGF QRRYGGITDP GTVPRVPSHF SRLPLGGWAE DGQSASRHPE PVPEEGSEDE 660
  661 LPPQVHKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle