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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2102660
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSTRGIVWG VLLLLLSEGL LGLYFPQRLY TENIYVGQQQ GSPLLQVISM REFPTERPYF  60
   61 FLCSHRDAFT SWFHIDEASV LYLNKTLEWS DFSSLRSGSV RSPKDLTLKV GVSSTPPMKV 120
  121 MCTILPTVEV KLSFINDTAP SCGQVELSTL CFPEKISNPH ITENREPGAL PTARFTHMRI 180
  181 CPNYTISYGV VAGSSVPFAV DDSTSELVVT AQVDREEKEV YHLDIVCMVR TERNLEEVGF 240
  241 RSLHVNIYDE DDNSPYVNGT DTEDVLVEFD RREGTVLGRL FVYDRDTTPV YPTNQVQNKL 300
  301 VGTLMTNDSW IKNNFAIEHK FREEKAIFGN VRGTVHEYKL NLSQNLSVTE QRSFLLGYLV 360
  361 NDTTFPGPEG TVLLHFNVTV LPVPIRFSNV TYSFTVSQKA TTYSQIGKVC VENCQKFKGI 420
  421 DVTYQLEIVD RNITAEAQSC YWAVSLGTKP EWIIQGVLYV NDTKVLRRPE CQELEYVVIA 480
  481 QEQQNKLQAK TQLTVSFQGE ADSLRTDVAN DFQHCAEKRQ RGDCEATRGL GAPTGRCQWR 540
  541 QGRDKGISKR YSTCSPNLGC PDGYCDAIES KNISICPQDC SSEAIIGGYE RDLYGIKAGH 600
  601 GTCYCFEGKC FCERDEPEDD ICNDMCKTVI ATGIILSFIV SVLLSSYFIH RYHKTTPKPP 660
  661 IASAEMTFRR PAQSYPISYS ANNVRRASLD SMENQVAIDT FKIPEDPKWE FPRKNLVLGK 720
  721 TLGEGEFGKV VKATAFRLKG KAGYTTVAVK MLKENASHSE LRDLLSEFTL LKQVNHPHVI 780
  781 KMYGACSQDG PLYLIVEYAK YGSLRNFLRE SRKVGPSYMG NDANRNSSYL ENPDERALTM 840
  841 GDLISFAWQI SRGMQYLAEM KLVHRDLAAR NVLVAEGRKM KISDFGLSRD VYEEDSYVKR 900
  901 SKGRIPVKWM ATESLFDHIY TTQSDVWSFG VLLWEIVTLG GNPYPGIAPE RLFNLLKTGY 960
  961 RMEKPENCTD EMYNLMLRCW KQESDKRPTF SDISKELEKM MVKSRDYLDL AASTPADALL1020
 1021 YDDSLSEEDT PLVDCSNAPL PRTLPSTWIE NKLYGMSYPN WPEKSPVPLN RLDATNPVFT1080
 1081 RYANDSVYAN WMALHSPAKI VDTIDS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle