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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|2134389, gi|3...
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GESQFAKIDT IAADESFTQV DIGDRIMKLN TEVRDVGPLS KKGFYLAFQD VGACIALVSV  60
   61 RVFYKKCPLT VRNLAQFPDT ITGADTSSLV EVRGSCVNNS EEKDVPKMYC GADGEWLVPI 120
  121 GNCLCNAGYE ERNGECQACK IGYYKALSTD VACAKCPPHS YSIWEGSTSC TCDRGFFRAE 180
  181 NDAASMPCTR PPSAPQNLIS NVNETSVNLE WSAPQNKGGR DDISYNVVCK RCGAGEPSHC 240
  241 RSCGSGVHFS PQQNGLKTTK VSITDLLAHT NYTFEVWAVN GVSKHNPSQD QAVSVTVTTN 300
  301 QAAPSPIALI QAKEITRHSV ALAWLEPDRP NGVILEYEVK YYEKDQNERT YRIVKTASRN 360
  361 TDIKGLNPLT SYVFHVRART AAGYGDFSGP FEFTTNTVPS PIIGDGTNPT VLLVSVAGSV 420
  421 VLVVILIAAF VISRRRSKYS KAKQEADEEK HLNQGVRTYV DPFTYEDPNQ AVREFAKEID 480
  481 ASCIKIEKVI GVGEFGEVCS GRLKVPGKRE ICVAIKTLKA GYTDKQRRDF LSEASIMGQF 540
  541 DHPNIIHLEG VVTKCKPVMI ITEYMENGSL DAFLRKNDGR FTVIQLVGML RGIGSGMKYL 600
  601 SDMSYVHRDL AARNILVNSN LVCKVSDFGM SRVLEDDPEA AYTTRGGKIP IRWTAPEAIA 660
  661 YRKFTSASDV WSYGIVMWEV MSYGERPYWD MSNQDVIKAI EEGYRLPPPM DCPIALHQLM 720
  721 LDCWQKERSD RPKFGQIVNM LDKLIRNPNS LKRTGSESSR PSTALLDPSS PEFSAVVSVS 780
  781 DWLQAIKMER YKDNFTAAGY TTLEAVVHMN QDDLARIGIT AITHQNKILS SVQAMRSQMQ 840
  841 QMHGRMVPV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle