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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|147903004, gi...
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLNSASGVV LQVLTQASSQ DSAVLKPAEE QLKQWETQPG FYTVLLTIFT NHSLDVNVRW  60
   61 LAVLYFKNGI DRYWRKVAPH ALSEEEKATL RAGLITNFNE PVNQIATQIA VLIAKVARLD 120
  121 CPKQWPELIP TLIESVKIQD DLRQHRALLT FYHVTKTLSS KRLAADRKLF QDLASEIYSF 180
  181 TCSLWNHHTD TFLQQICSGG EPAAINSLEK TLLSLKVLRK LTVHGFLEPH QNSDVTGFLL 240
  241 AVFVRLKQFL DCSRNIGAEH VCRERLEKII ILFTKVLLDF LDQHPISFIP LIQRSLEFAV 300
  301 SYVFTEAGDG ILFERFIVQC MSLIKRIVKE DCYIPSKNFE DSKPETINAH QIKQSFFTYQ 360
  361 TLTELCRRLV THYFILSDEE LAMWEEDPEG FAVEETGGDS WKYSLRPCSE VLFIDIFHEY 420
  421 SGTLTPVLLN MVDTIKGPTC VEDLNALRIK ETVYNAVGLA SYELFDCIDF DEWFQSQLLG 480
  481 ELGVAHDRYK LLRRRVIWLI GQWVSVKFKA DLRPLLYEAI LSLLQDPDLV VRVETATTLK 540
  541 LTVDDFEFRT EQFLPYLETT FSLLFQLLQQ VTECDSKMQV LHVLSCVIER VNMQIRPFVG 600
  601 CLIQYLPLLW KQSEEHNMLR CAILSTLVHL IKGLGSSSEN LYPFLLPVIQ LSTDVSQPPH 660
  661 VYLLEDGLEL WLVTLENCPS VTPELLRIFH NMSALLELSS ENLLICFKIV NAYIFSSSSE 720
  721 FLQIYAANLC QGFLQLLRDI TNEGQVEVLK VVENVLKVNP AVGPQIFQAL LPPVFRGIIE 780
  781 GEKYPVVMST YLGILGRVLL QNPSCFSSLL YQLSQEYNCE PDQILGNLIE MWVDRMDNIT 840
  841 QPERRKLSAL ALLSLLPSTS SIIQDKFCGI INVCVESLHD VMTEDPETST YKDCMLMPHI 900
  901 EEPQVSEDEE PPTEQDKRKK MLALIDPVHT VSLQQFVYEK LKAQQELLGE EGFRCLMETV 960
  961 DTEIVTQLQE FLKGF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle