YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|17939561
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.24
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PGGLGGRTMD SGTEEYELNG GLPPGTPGSP DASPARWGWR HGPINVNHYA SKKSAAESML  60
   61 DIALLMANAS QLKAVVEQGP SFAFYVPLVV LISISLVLQI GVGVLLIFLV KYDLNNPAKH 120
  121 AKLDFLNNLA TGLVFIIVVV NIFITAFGVQ KPLMDMAPQQ

Type	Start	End	Confidence
Cytoplasmic	1	57	0.63
Transmembrane Helix	58	72	0.24
Non-Cytoplasmic	73	83	0.51
Transmembrane Helix	84	110	0.86
Cytoplasmic	111	124	0.58
Transmembrane Helix	125	149	0.85
Non-Cytoplasmic	150	160	0.59