YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ADRM1_DANRE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSGALFPSL VSGSRSSSSK YLVEFRAGKM TLKGSTVTPD KRKGTVYIQQ TDDSLIHFCW  60
   61 KDRTSGNVED DLIIFPDDCE FKRVNQCTTG RVYVLKFKAG SKRLFFWMQE PKTDKDDEYC 120
  121 RKVNEYLNNP PMPGALGSGG GGGHELSALG EGGLQSLLGN MSHNQLMQLI GPTGLGGLGA 180
  181 LAGPGLASLL GSGGPATSSS TSSSRSQSAA ATPSSGSAAR LSSTQAPTTP VTPAATSSGS 240
  241 PTVTPTTPAA QTPSLPAGPA SSTQPIQLSD LQSILATMNV PAMPTEGSGV DLASVLTPDV 300
  301 MAPILANPEV QQRLLPYLPS GESLPQSAEE IQNTLTSPQF QQAMSMFSSA LASGQLGPLM 360
  361 NQFGLPSEAV DAANKGDVEA FAKAMEGSDS KTDDGDSKDK KDDDEDMSLD

Type	Start	End	Confidence
Signal Peptide	1	18	0.82
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	410	0.88