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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|110835696, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.40
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVPEKYSTL PAEDRSVHIV NICAIEDLGY LPSEGTLLNS LSVDPDAECK YGLYFRDGKR  60
   61 KVDYILVYHH KRASGSRTLA RRGLQNDMVL GTRSVRQDQP LPGKGSPVDA GSPEVPMDYH 120
  121 EDDKRFRREE YEGNLLEAGL ELENDEDTKI HGVGFVKIHA PWHVLCREAE FLKLKMPTKK 180
  181 VYHISETRGL LKTINSVLQK ITDPIQPKVA EHRPQTTKRL SYPFSREKQH LFDLTDRDSF 240
  241 FDSKTRSTIV YEILKRTTCT KAKYSMGITS LLANGVYSAA YPLHDGDYEG DNVEFNDRKL 300
  301 LYEEWASYGV FYKYQPIDLV RKYFGEKVGL YFAWLGAYTQ MLIPASIVGV IVFLYGCATV 360
  361 DENIPSMEMC DQRYNITMCP LCDKTCSYWK MSSACATARA SHLFDNPATV FFSVFMALWA 420
  421 ATFMEHWKRK QMRLNYRWDL TGFEEEEDHP RAEYEARVLE KSLRKESRNK ETDKVKLTWR 480
  481 DRFPAYFTNL VSIIFMIAVT FAIVLGVIIY RISTAAALAM NSSPSVRSNI RVTVTATAVI 540
  541 INLVVIILLD EVYGCIARWL TKIEVPKTEK SFEERLTFKA FLLKFVNSYT PIFYVAFFKG 600
  601 RFVGRPGDYV YIFRSFRMEE CAPGGCLMEL CIQLSIIMLG KQLIQNNLFE IGIPKMKKFI 660
  661 RYLKLRRQSP SDREEYVKRK QRYEVDFNLE PFAGLTPEYM EMIIQFGFVT LFVASFPLAP 720
  721 LFALLNNIIE IRLDAKKFVT ELRRPVAIRA KDIGIWYNIL RGVGKLAVII NAFVISFTSD 780
  781 FIPRLVYLYM YSQNGTMHGF VNHTLSSFNV SDFQNGTAPN DPLDLGYEVQ ICRYKDYREP 840
  841 PWSEHKYDIS KDFWAVLAAR LAFVIVFQNL VMFMSDFVDW VIPDIPKDIS QQIHKEKVLM 900
  901 VELFMREEQG KQQLLDTWME KEKPRDVPCN NHSPTTHPEA GDGSPVPSYE YHGDAL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle