YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21711785
Protein type:	Transmembrane
Type Confidence:	0.95
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDSVYVFAI GLQTLEQSHS LTLLNISCEE ENSWDGGLSL INYLNAVEWK GLTGPIQFKD  60
   61 GQRVQFKLDL IKLKQHSIVK VGEWTPHGHL NITEPSMFFD AGSMNVTLVV ITILETPYVM 120
  121 MHYGKNFTGN ERFYGFCVDI LETISREVGF DYILDLVPDR KYGAKDPETG EWNGMVAQLM 180
  181 KYKADLAVGS MTITYARESV IDFTKPFMNL GISILFKVPT SEPTRLFSFM NPLAIEIWIY 240
  241 VLIAYFLVSL CIYIVGKLSP IEWKCINACD LENISIGNQF SLTDSFWFTI GTFMQQSPDI 300
  301 YPRAMSTRII SSTWGFFSLI IVASYTANLA AFLTTERMIN PIENAEDLAS QTEISYGTLD 360
  361 SGSTMTFFRV CN

Type	Start	End	Confidence
Non-Cytoplasmic	1	233	0.70
Transmembrane Helix	234	256	0.89
Cytoplasmic	257	311	0.77
Transmembrane Helix	312	333	0.89
Non-Cytoplasmic	334	372	0.75