YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21711753
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.48
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYGDAFGPHK IIVYELPAGL GGVLPDTLES ANIDTVDVDA AYNTVVYVLL LQIFGAYLCY  60
   61 IFGKFACKIL IQGFSYAFPV SLTVPLSVTF LIAACGIRID DPCFFHDTIP DYLFFTSPSN 120
  121 FRFNNFVTEQ MAWAWILWLL SQTWIALHIW TPKCERLATT EKLFVQPMYS SLLIDQSMAL 180
  181 NRRRDDQADV KTEDLSEIEK EKGDEYYETI SVHTDRSSAP NKPSIKSSDN ITRIYSCATM 240
  241 WHETKDEMIE FLKSIMRMDE DQCARRVAQK YLRVLDPDYY EFETHIFFDD AFEISDHSDD 300
  301 DIQCNRFVKL LIATMDEAAS EIHQTTIRLR PPKKYPTPYG GRLVWTLPGK TKFITHLKDK 360
  361 DRIRHRKRWS QVMYMYYLLG HRLMELPISV DRKDAIAENT YLLTLDGDID FKPNAVTLLV 420
  421 DLMKKNKNLG AACGRIHPVG SGPMVWYQLF EYAIGHWLQK ATEHMIGCVL CSPGCFSLFR 480
  481 GKALMDDNVM KKYTTRSDEA RHYVQYDQGE DRWLCTLLLQ RGYRVEYSAA SDAYTHCPEG 540
  541 FNEFYNQRRR WVPSTIANIM DLLADAKRTI KINDNISLLY IFYQMMLMGG TILGPGTIFL 600
  601 MLVGAFVAAF RIDNWTSFHY NIVPILAFMF ICFTCKSNIQ LFVAQVLSTA YALIMMAVIV 660
  661 GTALQLGEDG IGSPSAIFLI SMVGSFFIAA CLHPQEFWCI TCGLIYLLSI PSMYLLLILY 720
  721 SIINLNVVSW GTREVVAKKT KKELEAEKKA AEEAKKRVKQ KSMLSFLQSG IGDNGDEEGS 780
  781 VEFSLAGLFR CIFCTHGKTS DEKQQLTSIA ESLDTIKHRM DTIESAVDPH GHHASRHGRR 840
  841 RTTSSGSKDH HLLTSVAEKS GDESDESDSD TSAEPKQERD FLTNPYWIED PDVRKGEVDF 900
  901 LSSTEIQFWK DLIDQYLYPI DNDPVEQARI AKDLKELRDS SVFAFFMINA LFVLIVFLLQ 960
  961 LNKDNIHVKW PFGVRTNITY DESTQEVHIS KEYLQLEPIG LVFVFFFALI LIIQFTAMLF1020
 1021 HRFGTISHIL ASTELNFCKK KSEDLTQDQL IDKHAVEIVK NLQRLQGIDG DYDNDSGSGP1080
 1081 DRIARRKTIQ NLEKARQPRR QIGTLDVAFK KRF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle