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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55250972, gi|...
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGVAAWLP FARAAAIGWM PVASAPMPPP PRDKKRGQDG LIILNVSGTR FQTWRNTLER  60
   61 YPDTLLGSTE RDFFFHEETN EYFFDRDPDI FRHILNFYRT GKLHYPRHEC ISAYDEELAF 120
  121 FGIIPEIIGD CCYEEYKDRR RENAERIQDD EENDNNNDLV MPDLSFRESM WRAFENPHTS 180
  181 TMALVFYYVT GFFIAVSVMA NVVETVPCGI SLNRAKELSC GERYALAFFC LDTACVMIFT 240
  241 VEYLLRLIAA PSRYKFVKSV MSIIDVVAIM PYYIGLVMTD NEDVSGAFVT LRVFRVFRIF 300
  301 KFSRHSAGLR ILGYTLKSCA SELGFLLFSL TMAIIIFATV MFYAEKGSSA SKFTSIPAAF 360
  361 WYTIVTMTTL GYGDMVPKTI MGKIFGSICS LSGVLVIALP VPVIVSNFSR IYHQSQRAEK 420
  421 RRAQKKTRLA RIRAAKSGGA NAYLQYKRNG MLVDMEEEAS KEAGQALVCK ANPTFETQHH 480
  481 HLLHCLEKTT NHEFVDEQTY ETSCMEVSLA KPSMSRSSSM SSSPHGLSSC CTRRNKRKSF 540
  541 NVPNSNMAGG RRGSIQELST IQIRERPLSN SRSSLNAKFE ETVPLNSEEP SYITAAVISM 600
  601 PTPPVTTPEG VDLASSHDFL QSNIVRVSAL 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle