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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21703694
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPSRPSRLSA AMAVVRVRAI VALLCLVAAL GLAQPLEEED GVLVLRAANF EQALAAHRHL  60
   61 LVEFYAPWCG HCKALAPEYA KAAAQLKAEG SEIRLAKVDA TEEAELAQQF GVRGYPTIKF 120
  121 FRNGDKAAPR EYTAGREADD IVSWLKKRTG PAATTLTDAA AAETLVDSSE VVVIGFFKDV 180
  181 TSDAAKEFLL AAESVDDIPF GISSSADVFS KYQLSQDGVV LFKKFDEGRN NFEGDLTKDN 240
  241 LLNFIKSNQL PLVIEFTEQT APKIFGGEIK THILLFLPKS VSDYEGKLDN FKTAAGNFKG 300
  301 KILFIFIDSD HSDNQRILEF FGLKKEECPA VRLITLEEEM TKYKPESDDL TADKIKEFCN 360
  361 KFLEGKIKPH LMSQDLPEDW DKQPVKVLVG KNFEEVAFDE NKNVFVEFYA PWCGHCKQLA 420
  421 PIWDKLGETY RDHENIVIAK MDSTANEVEA VKIHSFPTLK FFPAGSGRNV IDYNGERTLE 480
  481 GFKKFLESGG QDGAAADDDL EDLETDEETD LEEGDDDEQK IQKDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle