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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|17981441
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKTSAATAT QLARATSREC RTILGLFIVS AWSALLELAN CLRQDENRYV GHGRDVNASS  60
   61 DASDEVSMAR EQQQHQRQHS KHSASSSPAK SMRCTRAKAA SASTGTAAAT ATLGAAAAEG 120
  121 ATSGHQLGGQ PLMALLIGLL LLNFRLTAAG TCWQTHLGSG KCGQVFSTDI SRSECCGSSQ 180
  181 SFSYTDRELS SVEYFFATAI GGGVECSPCM ESCKGFKCGP NKKCVKRKGR PKCVCAPECG 240
  241 AALRRRTHQQ ELELEQEPEL EEEQQEMKPP RESRSLSSKN TNFNLGLDGG QRQRADNQRK 300
  301 LQPRESKHRR LLIIDSSSRS SSNLPDQPTS GRRGRVEMTG YERRRHRNNH GKHLTRSMTT 360
  361 GANDSFPADK TPAQSPAADS ILAQSRLANL ANANEPANDI NRQSSTRVRH QHARRIEHAP 420
  421 NPDNGLRKRQ HKQQQQHQHQ HQDRMNTEAQ SANTTVSGSG SGATNHRRIS QLQHGSETAA 480
  481 SSDLANTHDL AHLGGIYAPL PPQHSNPVCG TDGRTYNTEC QLRKRACRTN NAQLEVAYRG 540
  541 HCKNSCSGVH CLNGLTCVED QYLMPHCIAC RIECPWDNLD VDSSGYDERQ AVCGVDGKTY 600
  601 RSACDINRMI CKIGRSIAVA YPGPCRAGRV SCADIKCGPK DNCLVDLQTR QPRCVTCRYK 660
  661 CPRKQQRPVH KICGYNNQTY NSWCEMHKHS CESRYFIGVK SQGSC

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle