YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PEX32_ARATH
Protein type:	Transmembrane
Type Confidence:	0.63
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDFVRGFWRK HRRKVLVTAG CLGSGYLLYK LYNSHTRRLA DLERELAHER ENDEIIKTQM  60
   61 KAHFESIQMI VDSTTLPHAM QFLSIRISEE IDVSHVMDRL NQGKGMLSPP EKLQLWDELK 120
  121 ILSFTRMVLS LWSVTMLSLY IRVQVNILGR HLYVDTARAL GSSHLLEEVD LIDRDDEQKF 180
  181 LSSADFLVTN AMPSLISDMQ GSAEEVLKGK QLKDVITTRV LQETVMQIVD VFMSTGSPHH 240
  241 WVDYLMMPQD TKLSRTTSDS SDEAVSKFHQ LMVETREVLI STEFTNIVEI SLKCFTDVLV 300
  301 EEMETQTEAG GLATGKPLAK VLPQIEKTMN VITAEPSKNR FLQIIRDLPE VKLFFTLLYA 360
  361 NMPQ

Type	Start	End	Confidence
Cytoplasmic	1	14	0.55
Transmembrane Helix	15	29	0.54
Non-Cytoplasmic	30	364	0.92