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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FTSHA_ARATH
Protein type: Transmembrane
Type Confidence: 0.62
Topology Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFSKLGSSL ARSSRSKGFV YGGGVRSAVF NQGRLRAPQN LEAAVNQVDG GLGFLRRHFA  60
   61 SFAARKGLEA GDLSRAFANP RLRRFFSSQT PKKKNYENYY PKDSKKAPKN EQKSESRDGS 120
  121 KKNENENAGD AFSNEYQNML IPLMAIALIL STFSLGSREQ QQISFQEFKN KLLEAGLVDH 180
  181 IDVSNKEVAK VYVRSSPKSQ TTEEVVQGPG NGVPAKGRGG QYKYYFNIGS VESFEEKLEE 240
  241 AQEAIGVNSH DFVPVTYVSE TIWYQELLRF APTLLLVATL IFGARRMQGG LGGLGGPGGK 300
  301 AGRGIFNIGK AQITRADKNS KNKIYFKDVA GCEEAKQEIM EFVHFLQNPK KYEDLGAKIP 360
  361 KGALLVGPPG TGKTLLAKAT AGESAVPFLS ISGSDFMEMF VGVGPSRVRN LFQEARQCAP 420
  421 SIIFIDEIDA IGRARGRGGF SGGNDEREST LNQLLVEMDG FGTTAGVVVL AGTNRPDILD 480
  481 KALLRPGRFD RQITIDKPDI KGRDQIFQIY LKKIKLDHEP SYYSQRLAAL TPGFAGADIA 540
  541 NVCNEAALIA ARHEGATVTM AHFDSAIDRV IGGLEKKNRV ISKLERRTVA YHESGHAVAG 600
  601 WFLEHAEPLL KVTIVPRGTA ALGFAQYVPN ENLLMTKEQL FDMTCMTLGG RAAEQVLIGR 660
  661 ISTGAQNDLE KVTKMTYAQV AVYGFSDKIG LLSFPQREDE FSKPYSNRTG AMIDEEVREW 720
  721 VGKAYKRTVE LIEEHKEQVA QIAELLLEKE VLHQDDLTKV LGERPFKSGE TTNYDRFKSG 780
  781 FEESEKESQK ESVPVKPVED DGIPPLEPQV VPT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle